Subset linkSet object based on bait names
Subset linkSet object based on bait regions
Subset linkSet object based on other end (oe) regions
Usage
# S4 method for class 'linkSet'
subsetBait(x, subset)
# S4 method for class 'linkSet'
subsetBaitRegion(x, subset)
# S4 method for class 'linkSet'
subsetOE(x, subset)
Arguments
- x
A linkSet object
- subset
A GRanges object specifying the regions to keep
Value
A new linkSet object containing only the specified bait interactions
A new linkSet object containing only the interactions with bait regions overlapping the subset
A new linkSet object containing only the interactions with oe regions overlapping the subset