Cross gene enhancer

Cross gene enhancer

Usage

# S4 method for class 'linkSet'
crossGeneEnhancer(x, score_threshold = NULL)

Arguments

score_threshold

The minimum score to filter interactions

Value

A linkSet object with filtered interactions

Examples

data(linkExample)
linkSet = c(linkExample,linkExample)
linkSet = countInteractions(linkSet)
linkSet = filterLinks(linkSet, filter_intra = FALSE, filter_unannotate = FALSE, distance = 100000)
linkSet = crossGeneEnhancer(linkSet, score_threshold = 10)
#> Warning: score column not found.